A B C D E F G H I L M N O P R S T U V W X Y Z

A

accept(File) - Method in class calico.action.DataFileFilter

actionPerformed(ActionEvent) - Method in class calico.action.SaveFileAction

Implements actionPerformed method of AbstractAction.

actionPerformed(ActionEvent) - Method in class calico.action.ScatterPlotAction

Pops up the appropriate dialog and calls the ScatterPlot.

actionPerformed(ActionEvent) - Method in class calico.action.NewAction

Implements actionPerformed method

actionPerformed(ActionEvent) - Method in class calico.action.PrintAction

Implements actionPerformed method

actionPerformed(ActionEvent) - Method in class calico.action.InfoAction

Implements actionPerformed method to provide info

actionPerformed(ActionEvent) - Method in class calico.action.OpenAction

provides for open file dialog

actionPerformed(ActionEvent) - Method in class calico.action.RegressionAction

provides for open file dialog

actionPerformed(ActionEvent) - Method in class calico.action.HelpAction

Implements actionPerformed method of AbstractAction

actionPerformed(ActionEvent) - Method in class calico.action.HistogramAction

Implements ActionPerformed method of AbstractAction.

addDisplayComponent(JComponent) - Method in class calico.dataFrame.DataFrame

Removes old component and adds new component from right hand side of split frame.

addPoint(double, double) - Method in class calico.stat.RegressionCalculator

Adds a new point to the regression (for interactive use).

addTable() - Method in class calico.dataFrame.DataSheetTabbedPane

Adds a new (empty) data sheet to the tabbed pane

addTable(DataFile) - Method in class calico.dataFrame.DataSheetTabbedPane

add a data sheet constructed from a DataFile

addTable(DataSheetModel, boolean) - Method in class calico.dataFrame.DataSheetTabbedPane

Adds a new data sheet to the tabbed pane

AnalysisMenu - class calico.dataFrame.dFMenu.AnalysisMenu.

Constructs the AnalysisMenu for Calico.

AnalysisMenu(DataFrame) - Constructor for class calico.dataFrame.dFMenu.AnalysisMenu

AnalysisMenu constructor

AnalysisPane - class calico.stat.AnalysisPane.

Sets up a tabbed pane to hold various panels for regression analysis.

AnalysisPane(RegressionCalculator, String, String) - Constructor for class calico.stat.AnalysisPane

Constructor for the AnalysisPane

AxesPanel - class calico.stat.AxesPanel.

Provides a panel with appropriately labeled and scaled axes, to be used as a foundation class for graphing.

AxesPanel() - Constructor for class calico.stat.AxesPanel

Null argument constructor with a default viewport

AxesPanel(double, double, double, double) - Constructor for class calico.stat.AxesPanel

Constructor for a given viewport.

B

backgroundColor - Variable in class calico.graph.ScatterPlotPanel

backgroundColor - Variable in class calico.stat.HistogramPanel

backgroundColor - Variable in class calico.dataFrame.SplashPanel

binCount - Variable in class calico.stat.HistogramData

BOTTOM - Static variable in class calico.graph.ScatterPlotPanel

bottomOffset - Variable in class calico.stat.AxesPanel

BoxPlotPanel - class calico.graph.BoxPlotPanel.

Draws box plots of data

BoxPlotPanel(double[][], String[]) - Constructor for class calico.graph.BoxPlotPanel

constructor of BoxPlotPanel

C

calico - package calico

calico.action - package calico.action

calico.dataFrame - package calico.dataFrame

calico.dataFrame.dFMenu - package calico.dataFrame.dFMenu

calico.dataTable - package calico.dataTable

calico.graph - package calico.graph

calico.stat - package calico.stat

CalicoProperties - class calico.dataFrame.CalicoProperties.

The class CalicoProperties provides static methods for interpreting property files.

CalicoProperties(ResourceBundle) - Constructor for class calico.dataFrame.CalicoProperties

Constructor for CalicoProperties

CalicoToolBar - class calico.dataFrame.CalicoToolBar.

class CalicoToolBar sets up a tool bar for the frame.

CalicoToolBar(DataFrame) - Constructor for class calico.dataFrame.CalicoToolBar

constructor for CalicoToolBar

cdt - Static variable in class calico.action.DataFileFilter

classMark - Variable in class calico.stat.HistogramData

classMark - Variable in class calico.stat.HistogramPanel

classMarkLabel - Variable in class calico.stat.HistogramPanel

closeCurrentDataTable() - Method in class calico.dataFrame.DataSheetTabbedPane

Close the current selection

ColumnDialog - class calico.dataFrame.dFMenu.ColumnDialog.

Provides a JOptionPane for the user to choose a column

ColumnDialog(JFrame, String, String[], boolean) - Constructor for class calico.dataFrame.dFMenu.ColumnDialog

Constructor for the ColumnPlotDialog object

columnName - Variable in class calico.dataTable.DataSheetModel

columnSelectionInterval - Variable in class calico.dataTable.DataSheetModel

commentStringArray - Variable in class calico.dataTable.DataSheetModel

continuous - Variable in class calico.stat.HistogramPanel

count - Variable in class calico.stat.HistogramPanel

createDataSheetModel() - Method in class calico.dataFrame.DataFile

Return a DataSheetModel from the array of text lines

D

data - Variable in class calico.stat.HistogramData

DataApp - class calico.DataApp.

DataApp : application version of DataApplet by adding a DataFrame, which produces an external frame to run the applet in.

DataApp() - Constructor for class calico.DataApp

DataFile - class calico.dataFrame.DataFile.

class DataFile provides access to data files

DataFile(File, Component) - Constructor for class calico.dataFrame.DataFile

Constructor for DataFile

DataFile(InputStream, Component) - Constructor for class calico.dataFrame.DataFile

Constructor for DataFile

DataFileFilter - class calico.action.DataFileFilter.

DataFileFilter() - Constructor for class calico.action.DataFileFilter

DataFrame - class calico.dataFrame.DataFrame.

The class DataFrame extends JFrame, adding a menuBar, toolBar.

DataFrame(ResourceBundle) - Constructor for class calico.dataFrame.DataFrame

Constructor for DataFrame

DataMenu - class calico.dataFrame.dFMenu.DataMenu.

DataMenu constructs the "data" menu for Calico Stat, which loads provided data files.

DataMenu(DataFrame) - Constructor for class calico.dataFrame.dFMenu.DataMenu

DataMenu constructor

DataSheetModel - class calico.dataTable.DataSheetModel.

DataSheetModel holds the data for a DataTable

DataSheetModel(int, int) - Constructor for class calico.dataTable.DataSheetModel

Constructor for a new empty data sheet with specified dimensions

DataSheetModel(String[], File) - Constructor for class calico.dataTable.DataSheetModel

Constructor for DataSheetModel.

DataSheetTabbedPane - class calico.dataFrame.DataSheetTabbedPane.

The class DataSheetTabbedPane extends JTabbedPane for holding multiple data sheets.

DataSheetTabbedPane() - Constructor for class calico.dataFrame.DataSheetTabbedPane

Constructor for DataSheetTabbedPane Starts with one empty sheet

DataSheetTabbedPane(DataSheetModel) - Constructor for class calico.dataFrame.DataSheetTabbedPane

Constructor for DataSheetTabbedPane

DataTable - class calico.dataTable.DataTable.

DataTable constructs a scrollable table either from a DataSheetModel or a new blank table.

DataTable() - Constructor for class calico.dataTable.DataTable

DataTable(DataSheetModel, boolean) - Constructor for class calico.dataTable.DataTable

Constructor for DataTable

defaultMenuItemName - Static variable in class calico.dataFrame.dFMenu.DataMenu

DescriptiveStatistics - class calico.stat.DescriptiveStatistics.

Displays descriptive statistics from several data sets Data should be data[n][k] with n data sets, k data items

DescriptiveStatistics(DataFrame) - Constructor for class calico.stat.DescriptiveStatistics

Constructor for the DescriptiveStatistics

disableDoubleBuffering(Component) - Static method in class calico.action.PrintUtilities

The speed and quality of printing suffers dramatically if any of the containers have double buffering turned on.

doAutoscale(boolean) - Method in class calico.stat.RegressionPanel

doClassMarkLabels - Variable in class calico.stat.HistogramPanel

doDrawAxes(boolean) - Method in class calico.graph.ScatterPlotPanel

doDrawAxes: set whether to draw axes

drawAtEdges - Variable in class calico.graph.ScatterPlotPanel

drawAxes - Variable in class calico.graph.ScatterPlotPanel

drawHorizontalAtEdges - Variable in class calico.stat.AxesPanel

drawHorizontalScale - Variable in class calico.stat.HistogramPanel

drawLabels(Graphics, String[]) - Method in class calico.graph.BoxPlotPanel

drawPoints(Graphics) - Method in class calico.graph.ScatterPlotPanel

drawScaleAtEdges(boolean) - Method in class calico.graph.ScatterPlotPanel

drawScales(Graphics) - Method in class calico.graph.ScatterPlotPanel

drawTheoretical() - Method in interface calico.stat.HistogramIF

drawTheoretical() - Method in class calico.stat.HistogramData

drawTitle - Variable in class calico.graph.ScatterPlotPanel

drawTitle(Graphics) - Method in class calico.graph.ScatterPlotPanel

drawTitle(Graphics) - Method in class calico.graph.TimeSeriesPlotPanel

drawTitle(Graphics) - Method in class calico.graph.NormalPlotPanel

drawTitle(Graphics) - Method in class calico.stat.ResidualPanel

drawTitle(Graphics) - Method in class calico.stat.RegressionPanel

drawVerticalScale - Variable in class calico.stat.HistogramPanel

drawVerticalScale(Graphics, double, double[]) - Method in class calico.graph.BoxPlotPanel

DualColumnDialog - class calico.dataFrame.dFMenu.DualColumnDialog.

Provides a JOptionPane for the user to choose horizontal and vetical choices for a scatter plot

DualColumnDialog(JFrame, String, String, String[], boolean) - Constructor for class calico.dataFrame.dFMenu.DualColumnDialog

Constructor for the ScatterPlotDialog object

dummy - Variable in class calico.stat.HistogramData

E

EditMenu - class calico.dataFrame.dFMenu.EditMenu.

Constructs the EditMenu for Calico

EditMenu(DataFrame) - Constructor for class calico.dataFrame.dFMenu.EditMenu

EditMenu constructor.

enableDoubleBuffering(Component) - Static method in class calico.action.PrintUtilities

Re-enables double buffering globally.

EstimatePane - class calico.stat.EstimatePane.

Display statistics of regression

EstimatePane(RegressionCalculator) - Constructor for class calico.stat.EstimatePane

Constructor for EstimatePanel.

EstimatePane(RegressionCalculator, String, String) - Constructor for class calico.stat.EstimatePane

Constructor for EstimatePanel.

F

f - Variable in class calico.graph.ScatterPlotPanel

file - Variable in class calico.dataTable.DataSheetModel

FileMenu - class calico.dataFrame.dFMenu.FileMenu.

provides file menu for data frame

FileMenu(DataFrame) - Constructor for class calico.dataFrame.dFMenu.FileMenu

Constructor for FileMenu

findGrid(double, double, int) - Static method in class calico.graph.GraphMethods

Find good grid values for scales and grid lines

font - Variable in class calico.dataFrame.SplashPanel

fontColor - Variable in class calico.graph.ScatterPlotPanel

fontColor - Variable in class calico.stat.AxesPanel

fontColor - Variable in class calico.dataFrame.SplashPanel

formatString - Variable in class calico.dataTable.DataSheetModel

G

getActiveDataSheetModel() - Method in class calico.dataFrame.DataSheetTabbedPane

return the current DataSheetModel

getBinCount() - Method in interface calico.stat.HistogramIF

getBinCount() - Method in class calico.stat.HistogramData

getClassMarkLabels() - Method in interface calico.stat.HistogramIF

Gets class mark labels for bins.

getClassMarkLabels() - Method in class calico.stat.HistogramData

Accessor method for class mark labels.

getClassMarks() - Method in interface calico.stat.HistogramIF

getClassMarks() - Method in class calico.stat.HistogramData

getColumnCount() - Method in class calico.dataTable.DataSheetModel

getColumnName(int) - Method in class calico.dataTable.DataSheetModel

getColumnNames() - Method in class calico.dataTable.DataSheetModel

getColumnSelectionInterval() - Method in class calico.dataTable.DataSheetModel

Get column selection interval

getCommentLines() - Method in class calico.dataTable.DataSheetModel

Retrieve the comment lines of the data sheet

getComponent() - Method in class calico.graph.BoxPlotPanel

getComponent() - Method in interface calico.graph.GraphInfo

Gets the Component for the graph

getComponent() - Method in class calico.graph.TimeSeriesPlotPanel

Return this component for GraphInfo interface.

getComponent() - Method in class calico.graph.NormalPlotPanel

Gets the Component NormalPlotPanel

getDataLength() - Method in class calico.stat.RegressionCalculator

Gets the sample size.

getDataSheetModel() - Method in class calico.dataTable.DataTable

return the current DataSheetModel

getDataSheetTabbedPane() - Method in class calico.dataFrame.DataFrame

Accessor method for DataSheetTabbedPane (always the left component).

getDataTable() - Method in class calico.dataFrame.DataSheetTabbedPane

Gets the DataTable of the DataSheetTabbedPane

getDataX() - Method in class calico.stat.RegressionCalculator

Gets the x data for the regression.

getDataY() - Method in class calico.stat.RegressionCalculator

Gets the y data for the regression.

getDescription() - Method in class calico.action.DataFileFilter

getDoubleData(int) - Method in class calico.dataTable.DataSheetModel

accessor method for column of data

getEditMenu() - Method in class calico.dataFrame.DataFrame

Hook for setEditable

getExtension(File) - Method in class calico.action.DataFileFilter

getFile() - Method in class calico.dataTable.DataSheetModel

Accessor method for the file generating the data sheet

getFormatString() - Method in class calico.dataTable.DataSheetModel

Accessor method for format string

getGraphSize(int) - Method in class calico.graph.BoxPlotPanel

getGraphSize(int) - Method in interface calico.graph.GraphInfo

Gets the Graph Size NormalPlotPanel.

getGraphSize(int) - Method in class calico.graph.TimeSeriesPlotPanel

Gets the Graph Size NormalPlotPanel.

getGraphSize(int) - Method in class calico.graph.NormalPlotPanel

Gets the Graph Size NormalPlotPanel.

getGrid(int) - Method in class calico.graph.BoxPlotPanel

grid should be set by call to graphMethods.findGrid()

getGrid(int) - Method in interface calico.graph.GraphInfo

Grid should be set by call to graphMethods.findGrid().

getGrid(int) - Method in class calico.graph.TimeSeriesPlotPanel

Grid should be set by call to graphMethods.findGrid().

getGrid(int) - Method in class calico.graph.NormalPlotPanel

Grid should be set by call to graphMethods.findGrid().

getIntercept() - Method in class calico.stat.RegressionCalculator

Gets the intercept of the regression line.

getLowValue() - Method in interface calico.stat.HistogramIF

getLowValue() - Method in class calico.stat.HistogramData

getMax(int) - Method in class calico.graph.BoxPlotPanel

getMax(int) - Method in interface calico.graph.GraphInfo

Gets the maximum of the viewport in the specified direction.

getMax(int) - Method in class calico.graph.TimeSeriesPlotPanel

Gets the maximum of the viewport in the specified direction.

getMax(int) - Method in class calico.graph.NormalPlotPanel

Gets the maximum of the viewport in the specified direction.

getMaxAbsoluteResidual() - Method in class calico.stat.RegressionCalculator

Gets the maximum absolute residual.

getMaxScaleLabel() - Method in class calico.stat.PrettyScale

getMaxScaleValue() - Method in class calico.stat.PrettyScale

getMaxX() - Method in class calico.stat.RegressionCalculator

Gets the maximum of the x values.

getMaxY() - Method in class calico.stat.RegressionCalculator

Gets the maximum of the y values.

getMin(int) - Method in class calico.graph.BoxPlotPanel

getMin(int) - Method in interface calico.graph.GraphInfo

Gets the minimum of the viewport in the specified direction.

getMin(int) - Method in class calico.graph.TimeSeriesPlotPanel

Gets the minimum of the viewport in the specified direction.

getMin(int) - Method in class calico.graph.NormalPlotPanel

Gets the minimum of the viewport in the specified direction.

getMinScaleLabel() - Method in class calico.stat.PrettyScale

getMinScaleValue() - Method in class calico.stat.PrettyScale

getMinX() - Method in class calico.stat.RegressionCalculator

Gets the minimum of the x values.

getMinY() - Method in class calico.stat.RegressionCalculator

Gets the minimum of the y values.

getModel() - Method in class calico.stat.HistogramPanel

Gets the Model of the HistogramPanel

getMSE() - Method in class calico.stat.RegressionCalculator

Gets the mean square error MSE.

getMultipleSelectedIndices() - Method in class calico.dataFrame.dFMenu.DualColumnDialog

Gets the Selected Indices of the dialog Should only be called if multiSelect is true

getNumberBins() - Method in interface calico.stat.HistogramIF

getNumberBins() - Method in class calico.stat.HistogramData

getNumberOfLines() - Method in class calico.dataFrame.DataFile

Return the number of lines in the file

getNumericColumnNames() - Method in class calico.dataTable.DataSheetModel

Find the names of the numeric columns

getNumericColumns() - Method in class calico.dataTable.DataSheetModel

Determine which columns have numeric data

getOffset(int) - Method in class calico.graph.BoxPlotPanel

return topOffset for VERTICAL, leftOffset for HORIZONTAL

getOffset(int) - Method in interface calico.graph.GraphInfo

Return topOffset for VERTICAL, leftOffset for HORIZONTAL

getOffset(int) - Method in class calico.graph.TimeSeriesPlotPanel

Return topOffset for VERTICAL, leftOffset for HORIZONTAL.

getOffset(int) - Method in class calico.graph.NormalPlotPanel

Return topOffset for VERTICAL, leftOffset for HORIZONTAL

getP(double) - Method in class calico.stat.RegressionCalculator

Find the p value for a given value of F

getPearsonR() - Method in class calico.stat.RegressionCalculator

Gets the Pearson R statistic of the regression.

getProperties() - Method in class calico.dataFrame.DataFrame

Accessor method for properties

getResiduals() - Method in class calico.stat.RegressionCalculator

Gets the residuals of the regression.

getResourceString(String, String) - Method in class calico.dataFrame.CalicoProperties

Gets a string from ResourceBundle.

getResourceStringArray(String, String[]) - Method in class calico.dataFrame.CalicoProperties

Parses the ResourceBundle for a String Array

getRightComponent() - Method in class calico.dataFrame.DataFrame

Accessor method for right hand component of the split pane

getRowCount() - Method in class calico.dataTable.DataSheetModel

getScaleColor(int) - Method in class calico.graph.BoxPlotPanel

getScaleColor(int) - Method in interface calico.graph.GraphInfo

Gets the color of the indicated scale (axis).

getScaleColor(int) - Method in class calico.graph.TimeSeriesPlotPanel

Gets the color of the indicated scale (axis).

getScaleColor(int) - Method in class calico.graph.NormalPlotPanel

Gets the color of the indicated scale (axis).

getScaleFont(int) - Method in class calico.graph.BoxPlotPanel

getScaleFont(int) - Method in interface calico.graph.GraphInfo

Gets the font for the indicated scale.

getScaleFont(int) - Method in class calico.graph.TimeSeriesPlotPanel

Gets the font for the indicated scale.

getScaleFont(int) - Method in class calico.graph.NormalPlotPanel

Gets the font for the indicated scale.

getScaleFontColor(int) - Method in class calico.graph.BoxPlotPanel

getScaleFontColor(int) - Method in interface calico.graph.GraphInfo

Gets the color of the scale font.

getScaleFontColor(int) - Method in class calico.graph.TimeSeriesPlotPanel

Gets the color of the scale font.

getScaleFontColor(int) - Method in class calico.graph.NormalPlotPanel

Gets the color of the scale font.

getScaleLabel(int) - Method in class calico.graph.BoxPlotPanel

getScaleLabel(int) - Method in interface calico.graph.GraphInfo

Gets the label for the indicated scale.

getScaleLabel(int) - Method in class calico.graph.TimeSeriesPlotPanel

Gets the label for the indicated scale.

getScaleLabel(int) - Method in class calico.graph.NormalPlotPanel

Gets the label for the indicated scale.

getScaleLabels() - Method in class calico.stat.PrettyScale

getScalePosition(int) - Method in class calico.graph.BoxPlotPanel

getScalePosition(int) - Method in interface calico.graph.GraphInfo

Gets the location of vertical or horizontal scale

getScalePosition(int) - Method in class calico.graph.TimeSeriesPlotPanel

Gets the location of vertical or horizontal scale

getScalePosition(int) - Method in class calico.graph.NormalPlotPanel

Gets the location of vertical or horizontal scale

getScaleValues() - Method in class calico.stat.PrettyScale

getSelectedColumn() - Method in class calico.dataTable.DataSheetModel

Get selected column

getSelectedColumn() - Method in class calico.dataTable.DataTable

return the currently selected column returns (as in JTable) -1 if no column selected

getSelectedIndex() - Method in class calico.dataFrame.dFMenu.ColumnDialog

Gets the SelectedIndices of the DualColumnDialog Should only be called if multiSelect is false

getSelectedIndices() - Method in class calico.dataFrame.dFMenu.ColumnDialog

Gets the SelectedIndices of the DualColumnDialog Should only be called if multiSelect is true.

getSelectedIndices() - Method in class calico.dataFrame.dFMenu.DualColumnDialog

Gets the Selected Indices of the dialog Should only be called if multiSelect is false

getSlope() - Method in class calico.stat.RegressionCalculator

Gets the Slope of the regression line.

getSSE() - Method in class calico.stat.RegressionCalculator

Gets SSE = Syy - SSR.

getSSR() - Method in class calico.stat.RegressionCalculator

Gets SSR = Sxy * Sxy / Sxx;

getSumXSquared() - Method in class calico.stat.RegressionCalculator

Gets the sum of the x squared values.

getSxx() - Method in class calico.stat.RegressionCalculator

Gets the sum of the square x deviations from mean of x.

getSyy() - Method in class calico.stat.RegressionCalculator

Gets the sum of the square y deviations from mean of y.

getTextArray() - Method in class calico.dataTable.DataSheetModel

Accessor method for entire text array

getTheoreticalCount() - Method in interface calico.stat.HistogramIF

Gets the theoretical probabilities for a histogram.

getTheoreticalCount() - Method in class calico.stat.HistogramData

getTitle() - Method in class calico.dataTable.DataSheetModel

accessor method for title

getTitle() - Method in class calico.stat.HistogramPanel

Gets the Title of the HistogramPanel

getValueAt(int, int) - Method in class calico.dataTable.DataSheetModel

getXBar() - Method in class calico.stat.RegressionCalculator

Gets the mean XBar of x.

getYBar() - Method in class calico.stat.RegressionCalculator

Gets the mean YBar of y.

graphColor - Variable in class calico.graph.ScatterPlotPanel

graphHeight - Variable in class calico.graph.ScatterPlotPanel

GraphInfo - interface calico.graph.GraphInfo.

methods to be called by GraphMethods methods direction should be either GraphMethods.HORIZONTAL or GraphMethods.VERTICAL

GraphMenu - class calico.dataFrame.dFMenu.GraphMenu.

provides graph menu for data frame

GraphMenu(DataFrame) - Constructor for class calico.dataFrame.dFMenu.GraphMenu

Constructor for GraphMenu

GraphMethods - class calico.graph.GraphMethods.

static methods for graph classes

GraphMethods() - Constructor for class calico.graph.GraphMethods

graphSize - Variable in class calico.graph.ScatterPlotPanel

graphWidth - Variable in class calico.graph.ScatterPlotPanel

gridColor - Variable in class calico.graph.ScatterPlotPanel

H

hAxisLabel - Variable in class calico.graph.ScatterPlotPanel

HelpAction - class calico.action.HelpAction.

HelpAction responds to calls for help from either the menu or toolbar.

HelpAction(String, DataFrame) - Constructor for class calico.action.HelpAction

Constructor for HelpAction

HelpAction(String, Icon, DataFrame) - Constructor for class calico.action.HelpAction

Constructor for HelpAction

HelpMenu - class calico.dataFrame.dFMenu.HelpMenu.

Constructs the HelpMenu for Calico

HelpMenu(DataFrame) - Constructor for class calico.dataFrame.dFMenu.HelpMenu

HelpMenu constructor

hGrid - Variable in class calico.graph.ScatterPlotPanel

HIGH - Static variable in class calico.graph.ScatterPlotPanel

HIGH - Static variable in class calico.graph.GraphMethods

HistogramAction - class calico.action.HistogramAction.

HistogramAction responds to calls for a histogram.

HistogramAction(String, DataFrame) - Constructor for class calico.action.HistogramAction

Constructor for HistogramAction.

HistogramAction(String, Icon, DataFrame) - Constructor for class calico.action.HistogramAction

Constructor for the HistogramAction.

HistogramBox - class calico.stat.HistogramBox.

Provides a box for histogram panel and a slider to adjust the number of bins.

HistogramBox(HistogramPanel) - Constructor for class calico.stat.HistogramBox

Constructor for HistogramBox.

HistogramData - class calico.stat.HistogramData.

This class provides data in the form needed for HistogramPanel.

HistogramData(double[]) - Constructor for class calico.stat.HistogramData

Constructor for HistogramData.

HistogramIF - interface calico.stat.HistogramIF.

Defines methods for use by HistogramPanel

HistogramPanel - class calico.stat.HistogramPanel.

Draws a histogram given appropriate information

HistogramPanel(HistogramIF) - Constructor for class calico.stat.HistogramPanel

Initialize the histogram to draw theoretical distribution

HORIZONTAL - Static variable in class calico.graph.ScatterPlotPanel

HORIZONTAL - Static variable in class calico.graph.GraphMethods

I

InfoAction - class calico.action.InfoAction.

Provides information on a data sheet

InfoAction(String, DataFrame) - Constructor for class calico.action.InfoAction

Constructor for InfoAction

InfoAction(String, Icon, DataFrame) - Constructor for class calico.action.InfoAction

Constructor for InfoAction

InvalidDataFileException - exception calico.dataTable.InvalidDataFileException.

InvalidDataFileException() - Constructor for class calico.dataTable.InvalidDataFileException

InvalidDataFileException(String) - Constructor for class calico.dataTable.InvalidDataFileException

inverseScaleX(double) - Method in class calico.stat.AxesPanel

inverseScaleY(double) - Method in class calico.stat.AxesPanel

isCellEditable(int, int) - Method in class calico.dataTable.DataSheetModel

Determine whether the specified cell is editable

isLineGraph() - Method in class calico.graph.TimeSeriesPlotPanel

Accessor method for lineGraph, which indicates whether the graph is connected.

isSelectionOK() - Method in class calico.dataFrame.dFMenu.ColumnDialog

Did the user check ok on the dialog?

isSelectionOK() - Method in class calico.dataFrame.dFMenu.DualColumnDialog

Did the user check ok on the dialog?

L

labelAxes - Variable in class calico.graph.ScatterPlotPanel

LEFT - Static variable in class calico.graph.ScatterPlotPanel

leftOffset - Variable in class calico.stat.AxesPanel

LOW - Static variable in class calico.graph.ScatterPlotPanel

LOW - Static variable in class calico.graph.GraphMethods

M

main(String[]) - Static method in class calico.DataApp

maxData - Variable in class calico.stat.DescriptiveStatistics

maxData - Variable in class calico.stat.HistogramData

maxData - Variable in class calico.stat.PrettyScale

menuAction(ActionEvent) - Method in class calico.dataFrame.dFMenu.GraphMenu

Actions for those items which don't have separate action classes

minData - Variable in class calico.stat.DescriptiveStatistics

minData - Variable in class calico.stat.HistogramData

minData - Variable in class calico.stat.PrettyScale

N

NewAction - class calico.action.NewAction.

NewAction responds to calls for a new data sheet from either the menu or toolbar.

NewAction(String, DataFrame) - Constructor for class calico.action.NewAction

Constructor for NewAction

NewAction(String, Icon, DataFrame) - Constructor for class calico.action.NewAction

Constructor for NewAction

NormalPlotPanel - class calico.graph.NormalPlotPanel.

Provides normal plot of data

NormalPlotPanel(double[], String) - Constructor for class calico.graph.NormalPlotPanel

constructor for normal plot

numberBins - Variable in class calico.stat.HistogramData

numberBins - Variable in class calico.stat.HistogramPanel

numberColumns - Variable in class calico.dataTable.DataSheetModel

numberRows - Variable in class calico.dataTable.DataSheetModel

O

offset - Variable in class calico.graph.ScatterPlotPanel

OpenAction - class calico.action.OpenAction.

OpenAction responds to calls to open a file from either the menu or toolbar.

OpenAction(String, DataFrame) - Constructor for class calico.action.OpenAction

Constructor for OpenAction

OpenAction(String, Icon, DataFrame) - Constructor for class calico.action.OpenAction

Constructor for OpenAction

openFile(File) - Method in class calico.dataFrame.DataFile

openInputStream(InputStream) - Method in class calico.dataFrame.DataFile

Opens an InputStream and sets the lines

P

paint(Graphics) - Method in class calico.graph.ScatterPlotPanel

paint(Graphics) - Method in class calico.graph.BoxPlotPanel

paint method for BoxPlotPanel

paint(Graphics) - Method in class calico.graph.TimeSeriesPlotPanel

paint(Graphics) - Method in class calico.graph.NormalPlotPanel

Paint method for Panel

paint(Graphics) - Method in class calico.stat.AxesPanel

Paint method of panel.

paint(Graphics) - Method in class calico.stat.ResidualPanel

Paint method for ResidualPanel.

paint(Graphics) - Method in class calico.stat.HistogramPanel

Painting method for drawHistogram

paint(Graphics) - Method in class calico.stat.RegressionPanel

paint(Graphics) - Method in class calico.dataFrame.SplashPanel

paintBackground(Graphics) - Method in class calico.graph.ScatterPlotPanel

paintBackground(Graphics) - Method in class calico.graph.BoxPlotPanel

paintGrid(Graphics, double[], double[]) - Method in class calico.graph.ScatterPlotPanel

paintGrid(Graphics, float[], float[]) - Method in class calico.graph.NormalPlotPanel

paintScale(Graphics, double, double[], int) - Method in class calico.graph.ScatterPlotPanel

paintScale(Graphics, double, int) - Method in class calico.graph.ScatterPlotPanel

paintScale(Graphics, GraphInfo, int, boolean) - Static method in class calico.graph.GraphMethods

static method to paint a reasonable scale on a graph grid should be found be a call to findGrid above

paintVerticalGrid(Graphics, double[], int, int, Color) - Static method in class calico.graph.GraphMethods

Before using the grid to paint a vertical grid, need to scale locally

paintVerticalScale(Graphics) - Method in class calico.stat.HistogramPanel

draws vertical scale between left side and first bin

panelHeight - Variable in class calico.graph.ScatterPlotPanel

panelHeight - Variable in class calico.stat.AxesPanel

panelLabel - Static variable in class calico.stat.AnalysisPane

panelWidth - Variable in class calico.graph.ScatterPlotPanel

panelWidth - Variable in class calico.stat.AxesPanel

plotPoints - Variable in class calico.graph.ScatterPlotPanel

PrettyScale - class calico.stat.PrettyScale.

PrettyScale.java: given doubles minData and maxData attempts to calculate "reasonable" begin and end points for a scale.

PrettyScale(double, double) - Constructor for class calico.stat.PrettyScale

print() - Method in class calico.action.PrintUtilities

print(Graphics, PageFormat, int) - Method in class calico.action.PrintUtilities

PrintAction - class calico.action.PrintAction.

NewAction responds to calls for a new data sheet from either the menu or toolbar.

PrintAction(String, DataFrame) - Constructor for class calico.action.PrintAction

Constructor for NewAction

PrintAction(String, Icon, DataFrame) - Constructor for class calico.action.PrintAction

Constructor for NewAction

printComponent(Component) - Static method in class calico.action.PrintUtilities

PrintUtilities - class calico.action.PrintUtilities.

A simple utility class that lets you very simply print an arbitrary component.

PrintUtilities(Component) - Constructor for class calico.action.PrintUtilities

propertyChange(PropertyChangeEvent) - Method in class calico.action.SaveFileAction

R

range - Variable in class calico.graph.ScatterPlotPanel

RegressionAction - class calico.action.RegressionAction.

RegressionAction provides a dialog and conducts a linear regression.

RegressionAction(String, DataFrame) - Constructor for class calico.action.RegressionAction

Constructor for RegressionAction

RegressionAction(String, Icon, DataFrame) - Constructor for class calico.action.RegressionAction

Constructor for RegressionAction

RegressionCalculator - class calico.stat.RegressionCalculator.

RegressCalculator performs calculations for regressions.

RegressionCalculator(double[], double[]) - Constructor for class calico.stat.RegressionCalculator

Constructor for regression calculator.

RegressionPanel - class calico.stat.RegressionPanel.

This class is meant as a general purpose display for regressions.

RegressionPanel(RegressionCalculator, String, String) - Constructor for class calico.stat.RegressionPanel

reset() - Method in class calico.stat.RegressionCalculator

reset data to 0

ResidualBox - class calico.stat.ResidualBox.

Provides a box for several residual plots.

ResidualBox(RegressionCalculator) - Constructor for class calico.stat.ResidualBox

Constructor for ResidualBox.

ResidualPanel - class calico.stat.ResidualPanel.

Panel to display residuals from regression

ResidualPanel(RegressionCalculator) - Constructor for class calico.stat.ResidualPanel

constructor for ResidualPanel

RIGHT - Static variable in class calico.graph.ScatterPlotPanel

rightOffset - Variable in class calico.stat.AxesPanel

S

SAVE - Static variable in class calico.action.SaveFileAction

SAVE_AS - Static variable in class calico.action.SaveFileAction

SaveFileAction - class calico.action.SaveFileAction.

Provides a dialog for saving files

SaveFileAction(String, DataFrame, int) - Constructor for class calico.action.SaveFileAction

Constructor without icon

SaveFileAction(String, Icon, DataFrame, int) - Constructor for class calico.action.SaveFileAction

Constructor with icon

scale(double) - Method in class calico.graph.BoxPlotPanel

scale(double, double, double, int, int, int) - Static method in class calico.graph.GraphMethods

scale(double, int) - Method in class calico.graph.ScatterPlotPanel

scale(double, int) - Method in class calico.graph.BoxPlotPanel

scale(double, int) - Method in interface calico.graph.GraphInfo

Scale a value to the graph

scale(double, int) - Method in class calico.graph.TimeSeriesPlotPanel

scale(double, int) - Method in class calico.graph.NormalPlotPanel

Scale a value to the graph

scaleColor - Variable in class calico.graph.ScatterPlotPanel

scaleColor - Variable in class calico.stat.AxesPanel

scaleColor - Variable in class calico.stat.HistogramPanel

scaleX(double) - Method in class calico.stat.AxesPanel

scaleY(double) - Method in class calico.stat.AxesPanel

ScatterPlotAction - class calico.action.ScatterPlotAction.

Pops up dialog and runs the scatter plot

ScatterPlotAction(String, DataFrame, boolean) - Constructor for class calico.action.ScatterPlotAction

Constructor for ScatterPlotAction.

ScatterPlotAction(String, Icon, DataFrame, boolean) - Constructor for class calico.action.ScatterPlotAction

Constructor for ScatterPlotAction.

ScatterPlotController - class calico.graph.ScatterPlotController.

class pops up dialog and runs the scatter plot

ScatterPlotController(DataFrame, boolean) - Constructor for class calico.graph.ScatterPlotController

Constructor for ScatterPlotController we need to pass to the ScatterPlotController a way to show info dialogs and obtain the DataSheetModel

ScatterPlotMatrix - class calico.graph.ScatterPlotMatrix.

plots a square matrix of scatter plots of selected data

ScatterPlotMatrix(Point2D[][][], String[]) - Constructor for class calico.graph.ScatterPlotMatrix

constructor for ScatterPlotMatrix

ScatterPlotPanel - class calico.graph.ScatterPlotPanel.

ScatterPlotPanel(Point2D[]) - Constructor for class calico.graph.ScatterPlotPanel

Constructor for ScatterPlotPanel.

ScatterPlotPanel(Point2D[], String, String, String) - Constructor for class calico.graph.ScatterPlotPanel

Constructor for ScatterPlotPanel.

setBackgroundColor(Color) - Method in class calico.graph.ScatterPlotPanel

setBackgroundColor(Color) - Method in class calico.dataFrame.SplashPanel

setBinStep(int) - Method in class calico.stat.HistogramPanel

Adjust the number of pixels for each increase in the number of bins.

setColumnSelectionInterval(int, int) - Method in class calico.dataTable.DataSheetModel

Set column selection interval.

setDrawConfidenceBand(boolean) - Method in class calico.stat.RegressionPanel

setDrawHorizontalScaleAtEdges(boolean) - Method in class calico.stat.AxesPanel

setDrawPredictionBand(boolean) - Method in class calico.stat.RegressionPanel

setDrawVerticalScaleAtEdges(boolean) - Method in class calico.stat.AxesPanel

setEditable(boolean) - Method in class calico.dataTable.DataSheetModel

Set the data sheet to be editable

setEditableSelected(boolean) - Method in class calico.dataFrame.dFMenu.EditMenu

Sets editable selected,

setFont(Font) - Method in class calico.dataFrame.SplashPanel

setFontColor(Color) - Method in class calico.graph.ScatterPlotPanel

setFontColor(Color) - Method in class calico.stat.AxesPanel

Sets the color of the fonts

setGraphColor(Color) - Method in class calico.graph.ScatterPlotPanel

setGraphColors(Color[]) - Method in class calico.graph.ScatterPlotPanel

setGrid(double, double, int) - Method in class calico.graph.ScatterPlotPanel

setGridColor(Color) - Method in class calico.graph.ScatterPlotPanel

setHAxisLabel(String) - Method in class calico.graph.ScatterPlotPanel

setMaxFractionDigits(double, double) - Static method in class calico.graph.GraphMethods

setNumberBins(int) - Method in interface calico.stat.HistogramIF

setNumberBins(int) - Method in class calico.stat.HistogramData

setScaleColor(Color) - Method in class calico.graph.ScatterPlotPanel

setScaleColor(Color) - Method in class calico.stat.AxesPanel

Sets the color of the axes scales

setSelectedColumn(int) - Method in class calico.dataTable.DataSheetModel

Set selected column

setSelectedColumn(int) - Method in class calico.dataTable.DataTable

set the selected column to i

setText(String) - Method in class calico.dataFrame.SplashPanel

setTextColor(Color) - Method in class calico.dataFrame.SplashPanel

setTickDivisions(int) - Method in class calico.stat.AxesPanel

setTitle(String) - Method in class calico.dataTable.DataSheetModel

setter method for title;

setTitle(String) - Method in class calico.graph.ScatterPlotPanel

setTitle(String) - Method in class calico.stat.HistogramPanel

Sets the Title of the HistogramPanel.

setValueAt(Object, int, int) - Method in class calico.dataTable.DataSheetModel

Set the value at the specified location

setVAxisLabel(String) - Method in class calico.graph.ScatterPlotPanel

setViewport(double, double, double, double) - Method in class calico.graph.ScatterPlotPanel

setViewport sets the ranges of doubles to be plotted

setViewport(double, double, double, double) - Method in class calico.stat.AxesPanel

Sets the viewport.

setXRange(double, double) - Method in class calico.stat.AxesPanel

setYRange(double, double) - Method in class calico.stat.AxesPanel

showErrorDialog(String, String) - Method in class calico.dataFrame.DataFrame

showMsg(String) - Method in class calico.stat.EstimatePane

showMsg(String, AttributeSet) - Method in class calico.stat.DescriptiveStatistics

size - Variable in class calico.stat.HistogramData

Solve - class calico.stat.Solve.

Solve - solve cdf(x)=y within the given range Output Zeroin returns an estimate for the root with accuracy 4*EPSILON*abs(x) + tol Algorithm G.Forsythe, M.Malcolm, C.Moler, Computer methods for mathematical computations.

Solve() - Constructor for class calico.stat.Solve

SplashPanel - class calico.dataFrame.SplashPanel.

SplashPanel provides a splash screen

SplashPanel(String) - Constructor for class calico.dataFrame.SplashPanel

SplashPanel constructor

T

text - Variable in class calico.dataFrame.SplashPanel

textArray - Variable in class calico.dataTable.DataSheetModel

theoretical - Variable in class calico.stat.HistogramPanel

theoreticalCount - Variable in class calico.stat.HistogramPanel

tickDivisions - Variable in class calico.stat.AxesPanel

TimeSeriesPlotPanel - class calico.graph.TimeSeriesPlotPanel.

provides a plot of single or multiple time series

TimeSeriesPlotPanel(double[][], double[], String[]) - Constructor for class calico.graph.TimeSeriesPlotPanel

Constructor for multiple time series plots.

TimeSeriesPlotPanel(double[][], double[], String[], boolean) - Constructor for class calico.graph.TimeSeriesPlotPanel

Constructor for multiple time series plots

TimeSeriesPlotPanel(double[], double[], String, boolean) - Constructor for class calico.graph.TimeSeriesPlotPanel

Constructor for single time series plot.

title - Variable in class calico.dataTable.DataSheetModel

title - Variable in class calico.graph.ScatterPlotPanel

titleFont - Variable in class calico.graph.ScatterPlotPanel

titleFont - Variable in class calico.graph.TimeSeriesPlotPanel

titleFont - Variable in class calico.graph.NormalPlotPanel

titleFont - Variable in class calico.stat.RegressionPanel

toArray() - Method in class calico.dataFrame.DataFile

Returns the file as an array of strings

tokenize(String) - Static method in class calico.dataFrame.CalicoProperties

Take the given string and chop it up into a series of strings on whitespace boundries.

TOP - Static variable in class calico.graph.ScatterPlotPanel

topOffset - Variable in class calico.stat.AxesPanel

transformGrid(int, float) - Method in class calico.graph.BoxPlotPanel

transformGrid(int, float) - Method in interface calico.graph.GraphInfo

Transform the grid labels in the specified direction.

transformGrid(int, float) - Method in class calico.graph.TimeSeriesPlotPanel

Transform the grid values by identity transformation for GraphInfo.

transformGrid(int, float) - Method in class calico.graph.NormalPlotPanel

Transform the grid labels in the specified direction.

U

update(double[]) - Method in class calico.graph.NormalPlotPanel

Update the panel using new data

update(double[], double[]) - Method in class calico.graph.TimeSeriesPlotPanel

Update the panel given new data

update(HistogramIF) - Method in class calico.stat.HistogramPanel

Updates histogram data and repaints

update(RegressionCalculator) - Method in class calico.stat.EstimatePane

Updates the estimates from information in the RegressionCalculator.

update(RegressionCalculator) - Method in class calico.stat.ResidualPanel

Update the vector of residuals.

update(RegressionCalculator) - Method in class calico.stat.AnalysisPane

Update panels based on data in rc

update(RegressionCalculator) - Method in class calico.stat.ResidualBox

Update the sub panels with data from a RegressionCalculator

update(RegressionCalculator) - Method in class calico.stat.RegressionPanel

useClassMarkLabels() - Method in interface calico.stat.HistogramIF

useClassMarkLabels() - Method in class calico.stat.HistogramData

V

vAxisLabel - Variable in class calico.graph.ScatterPlotPanel

VERTICAL - Static variable in class calico.graph.ScatterPlotPanel

VERTICAL - Static variable in class calico.graph.GraphMethods

vGrid - Variable in class calico.graph.ScatterPlotPanel

W

windowActivated(WindowEvent) - Method in class calico.dataFrame.DataFrame

windowClosed(WindowEvent) - Method in class calico.dataFrame.DataFrame

windowClosing(WindowEvent) - Method in class calico.dataFrame.DataFrame

windowDeactivated(WindowEvent) - Method in class calico.dataFrame.DataFrame

windowDeiconified(WindowEvent) - Method in class calico.dataFrame.DataFrame

windowIconified(WindowEvent) - Method in class calico.dataFrame.DataFrame

windowOpened(WindowEvent) - Method in class calico.dataFrame.DataFrame

X

xRangeHigh - Variable in class calico.stat.AxesPanel

xRangeLow - Variable in class calico.stat.AxesPanel

Y

yRangeHigh - Variable in class calico.stat.AxesPanel

yRangeLow - Variable in class calico.stat.AxesPanel

Z

zeroin(double, double, Solve.FunctionWrapper, double, double) - Static method in class calico.stat.Solve

Find a zero in the specified interval with a given tolerance

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